Install from Github

First, install devtools:

if ("devtools" %in% rownames(installed.packages()) == FALSE) {install.packages("devtools")}
library(devtools)

Next, install SCISSOR:

install_github("hyochoi/SCISSOR")
library(SCISSOR)

R package dependencies

SCISSOR requires the following packages:

  • BiocManager
  • Rsamtools
  • GenomicRanges
  • refGenome
  • RColorBrewer
  • wesanderson
  • nloptr
  • zoo